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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940684.1_cds_XP_016484812.1_75789
CDS Infomation

[gene=LOC107805315] [db_xref=GeneID:107805315] [protein=eukaryotic translation initiation factor 3 subunit H isoform X2] [protein_id=XP_016484812.1] [location=join(31047..31056,31146..31225,32735..32851,32953..33056,33911..33977,34805..34938,35030..35078,35531..35602,35696..35797,35877..35944,37426..37578,38233..38290)] [gbkey=CDS]
Sequence

ATGGCAAACGTACCGAGGTCATTTTTGCAAGTTGCAGCTAAAGAAGAAGCTGTTGCACCG
CCAGTGAGAGCTGTTCAGATTGAAGGACTGGTCATTCTGAAGATAATAAAGCATTGCAAG
GAGTTTTCCCCAGCTTTGGTCACTGGACAACTTCTTGGATTGGATGTTGGAAGTGTTTTA
GAAGTCACTAACTGTTTTCCATTTCCGGTTCGTGAAGAAGATGAGGAGCTCGAGGCTGAG
GGTGCTAATTATCAGCTTGAAATGATGAGATGCCTGAGGGAGGTTAATGTTGACAACAAC
ACCGTTGGTTGGTATCAATCAACTTTATTTGGCTCTTTTCAAACTGTGGAATTGATAGAG
ACCTTCATGAATTACCAGGAGAATATTAAACGTTGTGTTTGCATTGTCTATGATCCATCA
AGATCCGACCAAGGCGTCTTAGCATTGAAGGCCTTGAAGCTTTCCGATTCTTTCATGGAA
CTCTACAAGAGTAACAACTTTACTGGAGAGAAGTTGAGGGAAAAGAATCTTTCATGGGTC
GACATCTTTGAAGAGATACCGATTAAAGTTTCAAACTCAGCTCTCATAAGTGCCTTCATG
ACTGAACTTGAACCTGATACACCTGTAACTCAGTGTGATTATGAGCGCCTACAATTGTCA
ACCAATCCATATTTGGAAAGGAATTTGGAATTTTTGATTGAGTGCATGGATGACTTGTCA
ATGGAACAGCAAAAGTTCCAATTTTACTATCGGAACCTTTCCCGTCAACAAGCTCAGCAG
CAAGCTTGGCTTCAAAAGAGGAGGGCTGAGAACATGTCACGTAAAGCTGCTGGAGAAGAG
CCACTACCGGAGGAAGATCCTTCTAATCCCGTCTTTAAGCCAATCCCAGAACCCTCACGA
TTGGACAGCTTTCTCATAACTAATCAAATAGCAAACTACTGCAACCAGATTAATGGTGTT
GCTGGACAGAGCTTCAGTAGACTTTATCTGATGAAGGCTCTTCACGAGAACTGA

Peptide Sequence

PEP ID

XP_016484812.1
PEP Infomation

PREDICTED: eukaryotic translation initiation factor 3 subunit H isoform X2 [Nicotiana tabacum]
Sequence

MANVPRSFLQVAAKEEAVAPPVRAVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL
EVTNCFPFPVREEDEELEAEGANYQLEMMRCLREVNVDNNTVGWYQSTLFGSFQTVELIE
TFMNYQENIKRCVCIVYDPSRSDQGVLALKALKLSDSFMELYKSNNFTGEKLREKNLSWV
DIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYERLQLSTNPYLERNLEFLIECMDDLS
MEQQKFQFYYRNLSRQQAQQQAWLQKRRAENMSRKAAGEEPLPEEDPSNPVFKPIPEPSR
LDSFLITNQIANYCNQINGVAGQSFSRLYLMKALHEN

Transcript Sequence

Gene sequence data has not been registered.